Matthew Benton
EMBL Heidelberg
Germany
EMBO Practical Course
Drosophila as a model system has remained a powerful driver of biological research for over a century. Emergence of techniques like CRISPR-Cas9, next-generation sequencing, single-molecule(sm) FISH, and single-cell genomics have dramatically expanded the toolkit available for research in Drosophila. These techniques are now routinely applied to answer important knowledge gaps in developmental biology, cell biology, physiology, neurobiology, genome regulation, evolution, behavior and population genetics.
This course will cover the latest advances in this direction through a combination of lectures delivered by world-renowned experts and hands-on practical sessions on the above topics delivered by excellent trainers – to help the participants rapidly absorb knowledge towards application for their own research. This course will play a key role in fostering the next generation of Drosophila biologists through transfer of this knowledge built up for over a century, opportunities for excellent networking and developing collaborations and long term relationships. We have incorporated new speakers, trainers and refreshed the content where relevant to remain up-to-date.
Based on the overwhelmingly positive feedback received from the 2023 course, which was 3-fold oversubscribed, we believe there is a strong argument to repeat this course to serve the large community of Drosophila biologists.
The course is aimed at PhD students and early-stage postdoctoral researchers who want to start using or enhance their knowledge of Drosophila as a model organism.
Training session will familiarize attendees with classical and modern approaches to fruit fly genetics and genomics, including genetic screens, CRISPR/Cas9 gene editing, cutting-edge imaging methods, single cell analyses, behavioral assays, and learning from wild-caught species.
“The best course I have attended, in a beautiful place and with people who are really interested in teaching, speaking and helping to train us. In addition, the program was complete and covered all the existing techniques, from the most traditional to the newest. The topics covered are exciting. And besides, we spent a wonderful week with laughter, delicious food and long evenings.” – Genoveva Guerrero, Centro Andaluz de Biología del Desarrollo, Spain
“Great course, I enjoyed every bit of it! The course offered detailed insights into the field of Drosophila genetics, with hands-on practicals that help to bring the theory and practice into a broader picture so that we can start right away by incorporating new ideas into our own research. I also enjoyed the networking opportunity to connect with the current and future top-notch scientists of the Drosophila community.” – Hannah Dickmänken, Stein Aerts lab, Belgium
This event has been granted the following EMBO sustainability badge:
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
University of Cambridge
United Kingdom
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
Institute of Functional Genomics of Lyon
France
Ludwig-Maximilians-Universität München
Germany
Brown University
USA
Institut Jacques Monod
France
University of Lausanne
Switzerland
Brown University
USA
Friedrich Miescher Laboratory
Germany
Technion-Israel Institute of Technology
Israel
University of Manchester
United Kingdom
Max Planck Institute of Molecular Cell Biology and Genetics
Germany
EMBL Heidelberg
Germany
Brown University
USA
Technion-Israel Institute of Technology
Israel
University of Manchester
United Kingdom
Course and Conference Officer
EMBL Heidelberg
Germany
Scientific Training Officer
EMBL Heidelberg
Germany
Are you on social media? Post using #EMBODrosophila and don’t forget to tag @EMBLEvents.
Time (Europe/Berlin) | Time (Europe/Berlin) | Time (Europe/Berlin) |
---|---|---|
13:30 – 13:40 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
13:40 – 14:15 | Registration and light refreshments | Courtyard Room A & B |
14:15 – 14:40 | Welcome and house notes and course overview | Courtyard Room A & B |
14:40 – 14:45 | Overview of the day The power of Drosophila as a model organism – Andreas Prokop | Courtyard Room A & B |
14:45 – 15:45 | Ice breaking activity: Flash talks | Courtyard Room A & B |
15:45 – 16:00 | Coffee Break | |
16:00 – 17:00 | Lecture: The power of Drosophila as a model and how to advocate it Andreas Prokop – University of Manchester, United Kingdom | Courtyard Room A & B |
17:00 – 18:00 | Treasure hunt | ATC |
18:00 – 19:30 | Practical 1: Drosophila anatomy, development, genetics and outreach/advocacy Matthew Benton – EMBL Heidelberg, Germany Lautaro Gandara – EMBL Heidelberg, Germany Andreas Prokop – University of Manchester, United Kingdom | Training Lab A & B |
19:30 – 19:45 | Bus to Hotel | EMBL Bus Stop |
19:45 – 21:45 | Dinner and Networking | ISG Hotel |
Time (Europe/Berlin) | Time (Europe/Berlin) | Time (Europe/Berlin) |
---|---|---|
08:35 – 08:50 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
08:50 – 09:00 | Overview of the day Discerning function through genetic perturbation – Kate O’Connor-Giles | Courtyard Room A & B |
09:00 – 09:20 | Lab safety instructions Ellen Malovrh – EMBL Heidelberg, Germany | Courtyard Room A & B |
09:20 – 10:20 | Lecture: Screen design in flies Lukas Neukomm – University of Lausanne, Switzerland | Courtyard Room A & B |
10:20 – 10:30 | Group photo | TBC |
10:30 – 11:00 | Coffee break and meet the speakers | |
11:00 – 12:00 | Lecture: Fly behavioural screens Karla Kaun – Brown University, USA | Courtyard Room A & B |
12:00 – 13:00 | Lunch | EMBL Canteen |
13:00 – 14:00 | Lecture: CRISPR design and screens in flie Kate O’Connor-Giles – Brown University, USA | Courtyard Room A & B |
14:00 – 15:00 | Practical 2: Applied CRISPR design in flies Noa Borst – EMBL Heidelberg, Germany Kate O’Connor-Gile – Brown University, USA Ella Preger Ben-Noon – Technion-Israel Institute of Technology, Israel Andreas Prokop – University of Manchester, United Kingdom | Computer Training Lab |
15:00 – 15:30 | Coffee break and meet the speakers | |
15:30 – 17:15 | Practical 2: Applied CRISPR design in flies (continued) Noa Borst – EMBL Heidelberg, Germany Kate O’Connor-Gile – Brown University, USA Ella Preger Ben-Noon – Technion-Israel Institute of Technology, Israel Andreas Prokop – University of Manchester, United Kingdom | Computer Training Lab |
17:15 – 17:45 | Poster session 1 – flash talks | Courtyard Room A & B |
17:45 – 19:45 | Poster session 1 | Helix A |
19:45 – 20:15 | Vegetarian dinner | EMBL Canteen |
20:15 – 20:30 | Bus to Hotel | EMBL Bus Stop |
Time (Europe/Berlin) | Session | Location |
---|---|---|
08:35 – 08:50 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
08:50 – 09:00 | Overview of the day Revealing new insights through live imaging – Justin Crocker | Courtyard Room A & B |
09:00 – 10:00 | Lecture: Imaging across scales Pavel Tomancak – Max Planck Institute of Molecular Cell Biology and Genetics, Germany | Courtyard Room A & B |
10:00 – 10:30 | Coffee break and meet the speakers | |
10:30 – 11:30 | Lecture: Quantitative imaging of transcription Sarah Bray – University of Cambridge, United Kingdom | Courtyard Room A & B |
11:30 – 12:30 | Introduction to live imaging in the fly and usage of FAIR principles in data processing and storage Justin Crocker – EMBL Heidelberg, Germany Pavel Tomancak – Max Planck Institute of Molecular Cell Biology and Genetics, Germany | Courtyard Room A & B |
12:30 – 13:30 | Lunch | EMBL Canteen |
13:30 – 15:30 | Practical 3: Live imaging in the fly Matthew Benton – EMBL Heidelberg, Germany Noa Borst – EMBL Heidelberg, Germany Sarah Bray – University of Cambridge, United Kingdom Justin Crocker – EMBL Heidelberg, Germany Pavel Tomancak – Max Planck Institute of Molecular Cell Biology and Genetics, Germany | Training Lab A & B |
15:30 – 16:00 | Coffee break and meet the speakers | |
16:00 – 17:30 | Practical 3: Live imaging in the fly (continued) Matthew Benton – EMBL Heidelberg, Germany Noa Borst – EMBL Heidelberg, Germany Sarah Bray – University of Cambridge, United Kingdom Justin Crocker – EMBL Heidelberg, Germany Pavel Tomancak – Max Planck Institute of Molecular Cell Biology and Genetics, Germany | Training Lab A & B |
17:30 – 18:00 | Poster session 2 – flash talks | Courtyard Room A & B |
18:00 – 19:00 | Pizza dinner | ATC Rooftop Lounge |
19:00 – 21:00 | Poster session 2 | Helix A |
21:00 – 21:15 | Bus to Hotel | EMBL Bus Stop |
Time (Europe/Berlin) | Session | Location |
---|---|---|
08:35 – 08:50 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
08:50 – 09:00 | Overview of the day New views from single cell genomics – Ella Preger-Ben-Noon | Courtyard Room A & B |
09:00 – 10:00 | Lecture: Systems biology of neural tissue differentiation Nikos Konstantinides – institut Jacques Monod, France | Courtyard Room A & B |
10:00 – 10:30 | Coffee break and meet the speakers | |
10:30 – 11:30 | Lecture: Three-dimensional organization of the genome Yad Ghavi-Helm – Institut de Génomique Fonctionnelle de Lyon, France | Courtyard Room A & B |
11:30 – 12:30 | Lecture: Genome regulation during developmental transitions Eileen Furlong – EMBL Heidelberg, Germany | Courtyard Room A & B |
12:30 – 13:30 | Lunch | EMBL Canteen |
13:30 – 15:00 | Practical 4: Genomics at single-cell resolution Eileen Furlong – EMBL Heidelberg, Germany Yad Ghavi-Helm – Institut de Génomique Fonctionnelle de Lyon, France Nikos Konstantinides – institut Jacques Monod, France Ella Preger Ben-Noon – Technion-Israel Institute of Technology, Israel | Training Lab A & B |
15:00 – 15:30 | Coffee break and meet the speakers | |
15:30 – 17:30 | Practical 4: Genomics at single-cell resolution (continued) Eileen Furlong – EMBL Heidelberg, Germany Yad Ghavi-Helm – Institut de Génomique Fonctionnelle de Lyon, France Nikos Konstantinides – institut Jacques Monod, France Ella Preger Ben-Noon – Technion-Israel Institute of Technology, Israel | Training Lab A & B |
17:30 – 19:00 | Career chat with trainers, speakers and organisers | ATC Rooftop Lounge |
19:00 – 20:00 | Dinner | EMBL Canteen |
20:00 – 20:15 | Bus to Hotel | EMBL Bus Stop |
Time (Europe/Berlin) | Session | Location |
---|---|---|
08:35 – 08:50 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
08:50 – 09:00 | Overview of the day Drosophila diversity and evolution – Ella Preger-Ben-Noon | Courtyard Room A & B |
09:00 – 10:00 | Lecture: The genetic basis of complex traits Luisa Pallares – Friedrich Miescher Lab, Germany | Courtyard Room A & B |
10:00 – 10:30 | Coffee break and meet the speakers | |
10:30 – 11:30 | Lecture: Genome regulation during developmental transitions Nicolas Gompel – University of Bonn, Germany | Courtyard Room A & B |
11:30 – 12:30 | Lecture: How to move from genomics to mechanisms? Ella Preger-Ben-Noon – Technion-Israel Institute of Technology, Israel | Courtyard Room A & B |
12:30 – 13:30 | Lunch | EMBL Canteen |
13:30 – 15:30 | Practical 5: Drosophila speciation and behavioral analysis Nicolas Gompel – University of Bonn, Germany Luisa Pallares – Friedrich Miescher Lab, Germany Ella Preger-Ben-Noon – Technion-Israel Institute of Technology, Israel | Training Lab A & B |
15:30 – 15:45 | Coffee break and meet the speakers | |
15:45 – 17:45 | Practical 5: Drosophila speciation and behavioral analysis (continued) Nicolas Gompel – University of Bonn, Germany Luisa Pallares – Friedrich Miescher Lab, Germany Ella Preger-Ben-Noon – Technion-Israel Institute of Technology, Israel | Training Lab A & B |
17:45 – 18:45 | Lecture: Understanding systems in context – Fruit flies, toxins and synthetic evolution Justin Crocker – EMBL Heidelberg, Germany | Courtyard Room A & B |
18:45 – 19:15 | Bus to dowtown, stop at ISG Hotel | EMBL Bus Stop |
19:15 – 20:00 | Free time downtown | |
20:00 – 22:30 | Downtown dinner | TBC |
Time (Europe/Berlin) | Session | Session |
---|---|---|
08:35 – 08:50 | Bus from hotel to EMBL ATC Entrance | ISG Hotel |
08:50 – 09:00 | Overview of the day Organismal interactions – Andreas Prokop | Courtyard Room A & B |
09:00 – 10:00 | Lecture: Genetics of metabolism TBC | Courtyard Room A & B |
10:00 – 10:30 | Coffee break and meet the speakers | |
10:30 – 12:00 | Practical 6: Analysis of feeding choice and metabolomics Matthew Benton – EMBL Heidelberg, Germany Karla Kaun – Brown University, USA Lautaro Gandara – EMBL Heidelberg, Germany | Training Lab A & B |
12:00 – 13:00 | Lunch | EMBL Canteen |
13:00 – 14:00 | Practical 6: Analysis of feeding choice and metabolomics (continued) Matthew Benton – EMBL Heidelberg, Germany Karla Kaun – Brown University, USA Lautaro Gandara – EMBL Heidelberg, Germany | Training Lab A & B |
14:00 – 14:45 | Course feedback round and debrief | Courtyard Room A & B |
14:45 – 15:15 | Bus to Hotel and Heidelberg main station | EMBL Bus Stop |
The course is limited to 24 participants. For selection purposes, please note that your application will not be considered without a letter of motivation.
Registration fees include admission, course materials, meals and coffee breaks. This EMBO course includes accommodation and transportation to and from the ISG Hotel to the venue
Academia | €550 |
PhD Student | €550 |
Industry | €1000 |
A letter to support your visa application will be issued, on request, once payment of the registration fee is confirmed. We recommend that you book your visa appointment as soon as possible, to avoid any delay with your visa application.
The registration fee should be paid only after acceptance to the course. The results will be announced approximately 2-3 weeks after the application deadline.
After you have logged in and successfully registered, you will receive an email asking you to submit your motivation letter. Click on the link provided and enter your motivation letter in the text box provided. Alternatively you can submit your motivation letter by clicking on the link on the confirmation page directly after registering.
Instructions
Please note:
For detailed instructions, please watch our video on how to submit a course motivation letter.
For further information about registration and motivation letter submission please refer to the FAQ page.
Limited financial assistance is provided by the EMBL Advanced Training Centre Corporate Partnership Programme and EMBO in the form of registration fee waivers, travel grants and childcare grants.
Your place in the meeting is only confirmed by paying the registration fee, which is mandatory even when receiving a fee waiver.
The fee waiver will cover the registration sum that you have paid to attend the course.
The travel grant will cover the cost of travel (airfare, train, bus, taxi, accommodation, visa, and/or registration fees*) and is provided up to specified caps which are normally as follows:
– up to €400 for participants travelling to an EMBL Course within Europe.
– up to €1000 for participants travelling to an EMBL Course from outside Europe.
– up to €500 for any participant travelling to an EMBO Practical Course.
– up to €1000 for any participant working in Chile, India, Singapore or Taiwan travelling to an EMBO Practical Course.
*Registration fees are only covered for EMBO Practical Courses
The organisers may reduce the grant cap to accommodate more participants. Recipients will be notified of their travel cap amount when they are informed of the outcome of their application. Original receipts must be provided with your signature for all costs incurred within two months of completion of travel. Scanned copies cannot be accepted.
There is the possibility to apply for a childcare grant to offset child care costs incurred by participants, speakers, trainers and organisers when attending a course. Eligible costs include (but are not limited to) fees for a babysitter or child-care facility and travel costs for a caregiver. Please note that priority will be given to early-stage researchers. There is a limited amount of funding available for the childcare grants and funds will be distributed amongst eligible applicants.
Applies to selected courses only. Availability will be indicated during the abstract or motivation letter submission process.
This grant covers costs related to your attendance to the course (registration, travel and accommodation costs). The grant is restricted to PhD students and postdocs who conduct basic biomedical research.
Whether you are eligible to apply for a travel grant, depends on when you received your university entrance qualification (e.g. Abitur, A-Levels, High School Diploma, Final State Examination):
– for PhD and MD students, as well as graduates, the university entrance qualification must not have been obtained more than 11 years ago at the time of the envisaged course
– for postdocs, the university entrance qualification must not have been obtained more than 13 years ago at the time of the envisaged course
If you are attending virtually, you can apply for financial assistance in the submission portal by the abstract deadline. Read the instructions on how to apply for financial assistance. Only submissions for financial assistance will be accepted. Presentation abstracts cannot be submitted here and will be declined.
In your application you will be asked to summarise your current work, answer questions regarding why your lab cannot fund your attendance, and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.
*For some events, applications for Childcare Grants will still be done by email. Information about the grant will be sent out shortly after the abstract/motivation letter deadline. Please contact the event Conference Officer if you have any questions.
The scientific organisers will select the recipients of registration fee waivers during the participant selection process for courses. Results will be announced approximately 6 – 8 weeks before the event start date, however for some events this may be delayed. Selection results do not impact your admission to the meeting. Selection for registration fee waivers and travel grants is based on scientific merit, your current work or study location, the reasons for needing financial support, and the impact this event will have on your career.
Childcare grants will be allocated in the same timeframe (6-8 weeks before the event start date). Please note that priority will be given to early-stage researchers.
Check out this list of external funding opportunities.
For further information about financial assistance please refer to the FAQ page.
The registration fee includes accommodation in twin rooms with breakfast. Accommodation will be booked for the selected participants at the ISG Hotel for the default dates of 3 to 8 August (5 nights).
In case you would like to have a single room, please let the hotel know and please note that you will be required to pay an additional cost of 32€ per night (availability of single rooms may be limited). This should be paid by you directly to the Hotel during your stay.
We recommend that all course participants stay at the ISG Hotel for the course.
For travel information, please see here.
If you are travelling to the conference within Germany then you are eligible for the Deutsche Bahn ‘Event Ticket’ (called the ‘Veranstaltungsticket’ in German). This will result in a lower ticket price if your travel distance to Heidelberg is more than 100 km. You need to provide proof of your event attendance when purchasing the ticket.
For more information in English see here or in German see here.
You can book your ticket here.
Shuttle buses will go from the ISG Hotel to EMBL and back, mornings and evenings. A bus schedule and location of the bus stops will be made available prior to the meeting.
Address: EMBL Heidelberg, Meyerhofstraße 1, 69117 Heidelberg, Germany
For more information about accommodation and travel, please refer to the FAQ page.
All meals and coffee breaks are included in the registration fee. Our catering staff will prepare a wide variety of vegetarian meals, meat and fish dishes, soups, pasta, fresh fruit and vegetables, as well as a variety of desserts.
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No food or drinks are allowed in the laboratories.
In most places the electricity is 220 volts AC (50 cycles). An adaptor and a plug that fits the German socket may be needed for your appliances/laptop (i.e. American, Japanese, etc.). A USB charging station for electronic devices is available at the registration desk..
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A variety of activities in Heidelberg can be found on the website of Heidelberg Marketing.
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Please find additional information including FAQs and terms and conditions on our Information for Participants page.
Sponsorship opportunities
We offer a variety of event sponsoring possibilities, with the flexibility to select a set sponsorship package or combine individual sponsorship options to suit your event budget. Discounts are available for companies sponsoring multiple events at EMBL Heidelberg. View other conferences, or contact sponsorship@embl.de for further information.
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Please also note that:
Suspicious communications purportedly from, for or on behalf of EMBL should be reported to EMBL at the following email address sponsoring@embl.de.
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Date: 3 - 8 Aug 2025
Location: EMBL Heidelberg
Venue: EMBL Advanced Training Centre
Deadline(s):
Registration: 4 May 2025
Organisers:
Contact: Catherine Casas-Saavedra