Renato Alves
EMBL Heidelberg
Germany
EMBL Course
EMBL is committed to sharing research advances and sustaining scientific interaction throughout the coronavirus pandemic. We are delighted to announce that the course is going virtual and invite you to join us online.
The missing step between data collection and research progress is a lack of training for researchers in crucial skills for effectively managing and analysing large amounts of data. This hands-on workshop teaches researchers the fundamental data skills they need to conduct their work and provides high-quality, domain-specific training covering the full lifecycle of data-driven research. The domain-specific approach allows participants to tailor the data, content, and tools to reflect the specific data and analysis needs of different areas.
The course is aimed at graduate students and other researchers in the life sciences who would like to learn good practices in data management and analysis. The course is ideally suited to students without prior experience in computational research, but some familiarity with working with tabular data on a computer is welcome.
“EMBL is doing an extraordinary job of reaching scientists from different backgrounds toward inter-disciplinary learning. The present era on multi-omics requires knowledge of programming, hence this data carpentry workshop was really useful for beginners. And the last-minute registration fee waiver award for persons in the waitlist was quite useful for me, as I have to attend this workshop without funding. It was a great experience learning R program and I am planning to adopt this in my current work. I am looking forward to an advanced data carpentry workshop focusing on genomic data analysis. EMBL courses are always on my wish list, as they are well organised and informative.” – Dinesh Kumar Kandaswamy, Cardiff University, United Kingdom
“Excellent course to learn basics of R. A very friendly group of instructors who were easy to interact with and patient with all the queries we had. Also, the organisation team made it very easy for us: the pre- and post-course preparations and also during the stay.” – Balagopal Pai, University of Regensburg, Germany
EMBL Heidelberg
Germany
University of Heidelberg
Germany
EMBL Heidelberg
Germany
DKFZ Heidelberg
Germany
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
Center for Research and Technology Hellas (CERTH)
Greece
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
EMBL Heidelberg
Germany
Center for Research and Technology Hellas (CERTH)
Greece
Deputy Head of Course and Conference Office
EMBL Heidelberg
Germany
Training Lab Technician
EMBL Heidelberg
Germany
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All times in the programme below are shown as the time in Europe/Berlin.
To find out the equivalent time zone in your location, enter Berlin, the programme time and date along with your city into the Time Zone Converter.
Time | Speaker |
---|---|
10:00 – 12:00 | Testrun |
Testing cloud /VM | |
Introduction to Material |
Time | Speaker |
---|---|
08:45-09:00 | check-in |
09:00-10:00 | Welcome and house notes and course overview and interactive onboarding |
10:00-10:30 | Lightning talks (instructors) |
10:30-10:45 | Break |
10:45-12:30 | Practical: Data organization in spreadsheets |
12:30-13:30 | Lunch break |
13:30-14:50 | Practical: OpenRefine for data cleaning |
14:50-15:00 | Coffee break |
15:00-15:40 | Interactive: Lightning talks (participants) |
15:40-15:50 | Coffee break |
15:50-17:00 | Social Programme: Speed networking: 1-1 |
09:45-10:00 | check-in of the day |
10:00-11:00 | Practical: Introduction to R |
11:00-11:10 | Coffee break |
11:10-12:30 | Practical: Introduction to R (cont.) |
12:30-13:30 | Lunch break |
13:30-14:50 | Practical: Introduction to R (cont.) |
14:50-15:00 | Coffee break |
15:00-15:40 | Interactive: Lightning talks (participants) |
Time | Speaker |
---|---|
09:45-10:00 | check-in of the day |
10:00-11:00 | Data analysis and visualization in R Data manipulation with dplyr |
11:00-11:10 | Coffee break |
11:10-12:30 | Practical: Data analysis and visualization in R (cont.) Data manipulation with dplyr |
12:30-13:30 | Lunch break |
13:30-14:50 | Practical: Data analysis and visualization in R (cont.) Data visualisation with ggplot2 |
14:50-15:00 | Coffee break |
15:00-16:00 | Practical: Data analysis and visualization in R (cont.) Data visualisation with ggplot2 (cont.) |
16:00-16:10 | Coffee break |
16:10-17:10 | Virtual Social Programme: TBC |
Time | Speaker |
---|---|
09:45-10:00 | check-in of the day |
10:00-11:00 | Practical: Data analysis and visualization in R (cont.) Data visualisation with ggplot2 (cont.) |
11:00-11:10 | Coffee break |
11:10-12:30 | Practical: Data analysis and visualization in R (cont.) Data visualisation with ggplot2 (cont.) |
12:30-13:30 | Lunch break |
13:30-14:50 | Practical: Data analysis with applications to genomics |
14:50-15:00 | Coffee break |
15:00-16:00 | Practical: Data analysis with applications to genomics (cont.) |
16:00-16:10 | Coffee break |
16:10-17:00 | Social programme: Quiz Time |
Time | Speaker |
---|---|
09:45-10:00 | check-in of the day |
10:00-11:00 | Practical: Data analysis with applications to genomics (cont.) |
11:00-11:10 | Coffee break |
11:10-12:30 | Practical: Data analysis with applications to genomics (cont.) |
12:30-13:30 | Group photo & Lunch break |
13:30-14:50 | Practical: Data analysis with applications to genomics (cont.) |
14:50-15:00 | Coffee break |
15:00-16:00 | Q&A session |
16:00-16:30 | Interactive: Discussion & Wrap-Up |
16:30 | End of course |
The course is limited to 26 participants. For selection purposes, please note that your application will not be considered without a letter of motivation.
Registration fees (include admission and all course materials):
Academia | 180 Euro |
PhD Student | 180 Euro |
Industry | 320 Euro |
The registration fee should be paid only after acceptance to the course. The results will be announced approximately 2-3 weeks after the application deadline.
After you have logged in and successfully registered, you will receive an email asking you to submit your motivation letter. Click on the link provided and enter your motivation letter in the text box provided. Alternatively you can submit your motivation letter by clicking on the link on the confirmation page directly after registering.
Instructions
Please note:
Motivation letter length: The maximum limit of 2000 characters (ca. 200 words) refers to manually typed text (spaces included).
Free field text length: The maximum characters for your answers in the free field text boxes is 255 (spaces included).Text only: If you copy-paste the text, hidden formatting might still be included and you will be informed that your text exceeds the character limit. We recommend either:
Symbols: If you have special symbols in your text make sure you are using Unicode characters, otherwise these will not be recognised by the tool.
For further information about registration and motivation letter submission please refer to the FAQ page.
Registration fee waivers
All academic and student registrants are invited to apply for a registration fee waiver, provided by the EMBL Advanced Training Centre Corporate Partnership Programme and EMBO. The registration fee waiver covers the registration sum that you have paid to attend the meeting. Conference participants are not required to pre-pay the registration fee to be selected for a fee waiver for a virtual meeting. If you have already paid the registration fee and are awarded a fee waiver, it will be reimbursed after the meeting. Course participants are required to pay the course fee in advance, which will then be reimbursed after the recipient has attended the course.
For participants and speakers with childcare responsibilities there is the possibility to apply for a grant, provided by the EMBL Advanced Training Centre Corporate Partnership Programme and EMBO, to offset childcare costs incurred when participating at a virtual event. Eligible costs include fees for a babysitter or childcare facility or travel costs for a care giver. Please note that priority will be given to early stage researchers. Costs will be reimbursed after the meeting only once a reimbursement form and original receipts have been received. Attendance at the event is required in order to be eligible to receive the reimbursement. In order to apply for this grant, you must be registered by the abstract submission deadline.
Applications for financial assistance can be submitted via the submission portal* (for the submission of abstracts for conferences or the submission of motivation letters for courses) by completing the Financial Assistance Application Section (underneath the section for entering abstract/motivation letter information). The link to the portal can be found in the registration confirmation email that you will receive after registering for the conference or course.
For conferences, if you are not submitting an abstract, you can still apply for financial assistance in the submission portal. Read the instructions on how to apply for financial assistance.
Note that priority will be given to those submitting an abstract to present at the conference. In your application you will be asked to answer questions regarding your motivation for applying, and, for registration fee waivers, the reasons why your lab cannot fund your attendance and how your attendance will make a difference to your career. Application for financial support will not affect the outcome of your registration application.
*For some events, applications for Childcare Grants will still be done by email. Information about the grant will be sent out shortly after the abstract/motivation letter deadline. Please contact the event Conference Officer if you have any questions.
The scientific organisers will select the recipients of registration fee waivers during the abstract selection process for conferences and the participant selection process for courses. Results will be announced approximately 3 – 4 weeks before the event start date. Selection results do not impact your admission to the meeting. Registration fee waiver selection is based on your current work or study location, your motivation for applying, the reasons for needing financial support and the impact this event will have on your career. Childcare grants are allocated based on career stage, with priority given to early stage researchers.
Check out this list of external funding opportunities or get more information on attending the conference as an event reporter.
For further information about financial assistance please refer to the FAQ page.
Below you will find the software and technical requirements for this course. You will need admin rights to be able to install the software on your computer and we recommend you try this before the course. If you do not have admin rights, please contact your technical support team in advance to make sure the software can be installed.
The EMBL eCampus learning platform will be used to collaborate, communicate and network with all of the course participants. All participants will receive information on how to join shortly before the course. We recommend using Chrome, Safari or Mozilla Firefox browsers for eCampus.
Zoom will be used for the live talks and Q&A sessions. More information will be provided closer to the start of the course.
While using the software during the course, please make sure you have nothing else using your bandwidth. We recommend using a wired connection.
Please find additional information including FAQs and terms and conditions on our Information for Participants page.
Sponsorship opportunities
We offer a variety of event sponsoring possibilities, with the flexibility to select a set sponsorship package or combine individual sponsorship options to suit your event budget. Discounts are available for companies sponsoring multiple events at EMBL Heidelberg. View other conferences, or contact sponsorship@embl.de for further information.
If you are interested in becoming a media partner of this event, please visit our media partnerships webpage.
Date: 31 Jan - 4 Feb 2022
Location: Virtual
Deadline(s):
Application: Closed
Organisers:
Contact: Maryann Heck