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Postdoctoral Programme

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EIPOD-LinC EMBL Hosts

Click on the names of the group leaders you are interested to find out more about their research and for their contact details. Some EMBL Hosts have also listed collaborators that that are relevant for the current EIPOD-LinC call.

EMBL Barcelona

Tissue Biology and Disease Modelling

Collaborations

Kristina Haase, EMBL Barcelona, Spain (Placental malaria, bioengineered placenta model)

Simone Mattei, EMBL Heidelberg, Germany (cryo-EM, Plasmodium, host-pathogen interactions)

Collaborations

Jan Korbel, EMBL Heidelberg, Germany (single cell genomics, automated autohigh-resolution imaging, organoid models of neuroendocrine development and cancer, cancer evolution, DNA structural rearrangements)

image of Vikas Trivedi

Vikas Trivedi

Group Leader and Co-chair of Theory at EMBL Transversal Theme

Trivedi Group

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Collaborations

Talya Dayton, EMBL Barcelona, Spain

Alba Diz Muñoz, EMBL Heidelberg, Germany

Julio Saez Rodriguez, EMBL-EBI, UK

Iñaki Ruiz Trillo, IBE, Barcelona, Spain

Maria Garcia Alai, EMBL Hamburg, Germany

Michael Dorrity, EMBL Heidelberg, Germany

Nicoletta Petridou, EMBL Heidelberg, Germany

Collaborations

Maria Bernabeu, EMBL Barcelona, Spain (endothelial mechanics and malaria-infected red blood cells)

Agathe Chaigne, Utrecht University, The Netherlands (mechanics of cell division and cytoplasmic bridges)

Rashi Priya, Francis Crick Institute, UK (heart morphogenesis)

Vikas Trivedi, EMBL Barcelona, Spain (self-organisation of multicellular systems)


EMBL Grenoble

Structural Biology

Collaborations

Misha Savitsky, EMBL Heidelberg, Germany (Complete ammonia oxidation bacteria; integrative structural biology of microbial dark matter; 
Thermal Proteome Profiling; visual proteomics)

Holger Daims, University of Vienna, Austria (MComplete ammonia oxidation bacteria; integrative structural biology of microbial dark matter; Thermal Proteome Profiling; visual proteomics)

Michael Wagner, University of Vienna, Austria (Complete ammonia oxidation bacteria; integrative structural biology of microbial dark matter; Thermal Proteome Profiling; visual proteomics)

EMBL Hamburg

Structural Biology

Collaborations

Donato Giovannelli, University of Naples, Italy (microbiology, extreme environments, biogeochemistry, extremozymes) 

Vikas Trivedi, EMBL Barcelona, Spain


EMBL Heidelberg

Cell Biology and Biophysics

Collaborations

Philippe Bastin, Pasteur, France (Evolution of pathogenesis)

Monica Bettencourt-Sias,IGC, Portugal (Evolution of the microtubule cytoskeleton)

Thibaut Brunet, Pasteur, France (Evolution of the actin cytoskeletan)

Yasin Dagdas, GMI Vienna, Austria (life cycles in red algae)

Sinem Saka, EMBL Heidelberg, Germany (Integrating spatial omics with expansion microscopy)

Andela Saric, IST, Austria (Biophysics of nuclear remodeling)

Jordi van Gestel, EMBL Heidelberg (Physiology and ecology of Slime moulds)

Collaborations

Niccolo Banterle, EMBL Heidelberg, Germany (Microtubule organisation)

Gautam Dey, EMBL Heidelberg, Germany (Ciliate hydrodynamics)

Caren Norden, IGC, Portugal (Nuclear mechanics)

Thomas Quail, EMBL Heidelberg, Germany (Droplet physics and chromatin)

Jordi van Gestel, EMBL Heidelberg, Germany (Evolution of fruiting body mechanics)

Flora Vincent, EMBL Heidelberg, Germany (Size dynamics of diatoms)

Hanh Vu, EMBL Heidelberg, Germany (Body size control, planarian tissue mechanics)

Collaborations

Brice Bathellier, Institut Pasteur France (Auditory neuroscience, functional brain imaging)

Kareem Elsayad, Medical University of Vienna, Austria (Biophysics, brillouin microscopy)

Sylvain Gigan, Laboratoire Kastler-Brossel, France (Computational imaging, adaptive optics)

Martin Jechlinger, MOLIT Heilbronn, Germany (Organoid intravital imaging, optical coherence microscopy)

Anna Kreschuk, EMBL Heidelberg, Germany (Computational image analysis, machine learning)

Collaborations

Detlev Arendt, EMBL Heidelberg, Germany

Johan Decelle, CNRS, France

Liz Duke, EMBL Hamburg, Germany

Anna Kreschuk, EMBL Heidelberg, Germany

Flora Vincent, EMBL Heidelberg, Germany

EMBL Heidelberg

Developmental Biology

Collaborations

Gautam Dey, EMBL Heidelberg, Germany

Anna Erzberger, EMBL Heidelberg, Germany

John Less, EMBL-EBI Hinxton, UK

Nassos Typas, EMBL Heidelberg, Germany

Collaborations

Omaya Dudin, University of Geneva, Switzerland (Development, multicellularity, stramenopiles, marine microbial interactions, expansion microscopy)

EMBL Heidelberg

Genome Biology

Collaborations

Talya Dayton, EMBL Barcelona, Spain (Single cell genomics, automated autohigh-resolution imaging, organoid models of neuroendocrine development and cancer, cancer evolution, DNA structural rearrangements )

Collaborations

Aedín Culhane, University of Limerick, Ireland (Dimension reduction and latent spaces for (single cell resolution) omics data)

Sascha Dietrich, University Hospital Düsseldorf, Germany (Spatial omics, immunotherapies and the tumor microenvironment, immunooncology)

Anna Kreshuk, EMBL Heidelberg, Germany (Biological phenotyping in imaging-based latent spaces, foundation models, LLMs)

Davide Risso, University of Padova, Italy (Statistical method development for spatial omics, deep learning, latent space models)

Sinem Saka, EMBL Heidelberg, Germany (Spatial biology from molecules to tissues)

Misha Savitski, EMBL Heidelberg, Germany (Stability proteomics)

Oliver Stegle, EMBL Heidelberg, Germany (Statistical genomics and systems genetics)

Lars Steinmetz, EMBL Heidelberg, Germany (Statistical method development for phenotyping environmental microbial communities using high-speed fluorescence image–enabled cell sorting)

Nassos Typas, EMBL Heidelberg, Germany (High-throughput phenotyping of microbial communities under genetic and chemical perturbations; antibiotica, phages)

Thorsten Zenz, University Hospital Zürich, Switzerland (Omics of drug sensitivity in blood cancers)

EMBL Heidelberg

Molecular Systems Biology

Collaborations

Collaborations

Lionel A Christiaen, Michael Sars Centre, Bergen, Norway (The hallmarks of thermal adaptation: insights from aquatic chordates)

image of Julia Mahamid

Julia Mahamid

Head of Molecular Systems Biology Unit

Mahamid Group

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Collaborations

Anna Kreshuk, EMBL Heidelberg, Germany (Cryo-ET, Deep learning for image analysis)

Misha Savitski, EMBL Heidelberg, Germany (Cryo-ET, multi-omics, T-cells, visual proteomics, bacteria)

Joel Selkrig, Uniklinik RWTH Aachen, Germany (Visual proteomics, bacteria)

Nassos Typas, EMBL Heidelberg, Germany (Visual proteomics, bacteria)

Judith Zaugg, University of Basel, Switzerland (Cryo-ET, multi-omics, T-cells)

Collaborations

Nassos Typas, EMBL Heidelberg, Germany (Functional proteomics, microbiology)

image of Nassos Typas

Nassos Typas

Head of Molecular Systems Biology Unit

Molecular Systems Biology Unit

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Collaborations

Jean-Francois Collet, Université Catholique de Louvain, Belgium (Bacterial cell envelope)

Rotem Sorek, Weizmann, Israel (Bacterial innate immunity)

Till Strowig, HZI (Human gut microbiome, colonisation resistance)

Jordi van Gestel, EMBL Heidelberg, Germany (Microbial communities, cell biology)

Karina Xavier, GIMM, Portugal (Human gut microbiome, interspecies communication and interactions)


EMBL Rome

Epigenetics and Neurobiology


EMBL-EBI Hinxton

Collaborations

Collaborations

Kristina Haase, EMBL Barcelona, Spain

Misha Savitski, EMBL Heidelberg, Germany

Sinem Saka, EMBL Heidelberg, Germany

James Sharpe EMBL Barcelona, Spain

Vikas Trivedi, EMBL Barcelona, Spain


The EIPOD programme underlines EMBL’s strong commitment to promoting interdisciplinary research.

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