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single-cell sequencing

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24 September 2024 Single Cell Expression Atlas logo on green background

Single Cell Expression Atlas 21 released

New datasets The release has 381 single-cell RNA-Seq experiments, consisting of more than 13.5 million cells from 21 different species to explore in the Single Cell Expression Atlas (SCEA). The resource now includes an entirely new class of data – externally analysed data, marked with an…

2024

updates-from-data-resources

7 July 2022 Single Cell Expression Atlas logo on green background

Interactive data visualisation for Single Cell Expression Atlas

Using powerful data visualisation and interactive search results across datasets allows users to explore hypotheses across a range of metadata, and discover new insights backed by expertly curated, consistently reanalysed single cell sequencing data. Searching for metadata, allows a powerful…

2022

updates-from-data-resources

6 September 2021 Cells organised according to their transcript data changing to the seqFISH mouse embryo map.

The Spatial Mouse Atlas: new insights into cell fate

Science & Technology Researchers have combined spatial gene expression information with single-cell genomics data to create a high-resolution atlas of mouse organogenesis.

2021

sciencescience-technology

4 March 2021

Induced pluripotent stem cells reveal causes of disease

Science & Technology Scientists in the Stegle group and colleagues have studied induced pluripotent stem cells from around 1,000 donors to identify correlations between individual genetic variants and altered gene expression. They linked more than 4,000 of the genetic variants responsible for altered expression…

2021

sciencescience-technology

2 March 2021 Microscopy image of stem cells in bone marrow

New avenues for eradicating cancer

Science & Technology A new method has the potential to boost international research efforts to find drugs that eradicate cancer at its source.

2021

sciencescience-technology

2 September 2020 Microscopy image of cerebral organoid cross section

An organoid cell atlas to enhance biomedical research

EMBL AnnouncementsLab Matters EMBL-EBI is one of the eight European institutes involved in the Humanoid Cell Atlas initiative, a new open-access platform that combines single-cell profiling and organoid technology

2020

embl-announcementslab-matters

1 June 2020 An illustration of single-cell RNA sequencing (scRNA-seq)

Enabling functional genomics studies in individual cells

Science & Technology Scientists at EMBL Heidelberg have developed a new method, called Targeted Perturb-seq (TAP-seq), which increases the scale and precision of functional genomics CRISPR–Cas9 screens by orders of magnitude. Their method overcomes limitations in previous applications of single-cell RNA sequencing,…

2020

sciencescience-technology

9 June 2017

Mapping gene expression, cell by cell

Science & Technology EMBL researchers complete a molecular atlas showing gene expression in all cells in an entire animal

2017

sciencescience-technology

1 June 2017 Human Cell Atlas logo and motif

Human Cell Atlas data platform kicks off

Lab MattersScience & Technology EMBL-EBI, the Broad and UCSC Genomics Institute to build Data Coordination Platform with CZI support

2017

lab-mattersscience-technology

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